Comparison among Feature Encoding Techniques for HIV-1 Protease Cleavage Specificity
Journal Title: International Journal of Intelligent Systems and Applications in Engineering - Year 2015, Vol 3, Issue 2
Abstract
HIV-1 protease which is responsible for the generation of infectious viral particles by cleaving the virus polypeptides, play an indispensable role in the life cycle of HIV-1. Knowledge of the substrate specificity of HIV-1 protease will pave the way of development of efficacious HIV-1 protease inhibitors. In the prediction of HIV-1 protease cleavage site techniques, many efforts have been devoted. Last decade, several works have approached the prediction of HIV-1 protease cleavage site problem by applying a number of methods from the field of machine learning. However, it is still difficult for researchers to choose the best method due to the lack of an effective and up-to-date comparison.
Authors and Affiliations
Uğur Turhal| University of Balıkesir – 10100, Turkey, Murat Gök*| University of Yalova – 77100, Turkey, Aykut Durgut| University of Balıkesir – 10100, Turkey
Keywords
Related Articles
- EP ID EP771
- DOI 10.18201/ijisae.21005
- Views 402
- Downloads 23
Matlab’s GA and Optimization Toolbox: A Fourbar Mechanism Application
This study presents an optimization approach for synthesis of planar mechanisms. A four bar mechanism is chosen for an application example. This mechanism is studied with the constraints assigned. Genetic Algorithm (GA)...
Classification of Leaf Type Using Artificial Neural Networks
A number of shape features for automatic plant recognition based on digital image processing have been proposed by Pauwels et al. in 2009. Then Silva et al in 2014 have presented database comprises 40 different plant spec...
Rainfall estimation for the south shore of the Mediterranean Sea using MSG infrared images
The objective of this paper is the estimation of rainfall over the Algerian territory using MSG (Meteosat Second Generation) infrared data. To achieve this aim, we applied a calibrated GPI (GOES Precipitation Index) appr...
About a discussion ‘‘Development a new mutation operator to solve the Traveling Salesman Problem by aid of genetic algorithms’’, by Murat Albayrak and Novruz Allahverdi, 2011. Expert System with Applications, 38; 3, pp. 1313–1320.
In the Short Communication published in “Expert Systems with Application” in volume 41 2014, (Comments on "Albayrak, M., & Allahverdi N. (2011). Development a new mutation operator to solve the Traveling Salesman Problem...
Epileptic State Detection: Pre-ictal, Inter-ictal, Ictal
Epileptic seizure detection and prediction from electroencephalography (EEG) is a vital area of research. In this study, Second-Order Difference Plot (SODP) is used to extract features based on consecutive difference of...