18S ribosomal DNA based PCR diagnostic assay for Trichomonas vaginalis infection in symptomatic and asymptomatic women in India
Journal Title: Asian Pacific Journal of Tropical Disease - Year 2012, Vol 2, Issue 2
Abstract
Objective: To identify the cases of trichomoniasis in symptomatic and asymptomatic Trichomonas vaginalis (T. vaginalis) infected patients by PCR amplification of hypervariable 18S rRNA gene and to assess the sensitivity of restriction fragment length polymorphism (RFLP) technique for their diagnosis. Methods: We enrolled 498 women of child bearing age groups, with their pre-informed consent, attending OPD for their routine checkups and STI related problems. Trichomoniasis was diagnosed on the basis of wet mount preparations and PCR with a primer set targeting a well-conserved region in the 18S rRNA genes of T. vaginalis, respectively. Sequencing was done for differentiating the symptomatic and asymptomatic strains of axenic and clinical isolates. Results: After PCR diagnosis T. vaginalis infection was detected in 17 (3.42%) out of 498 clinical isolates. Seventeen axenic and sixteen clinical strains of T. vaginalis tested were successfully detected by PCR yielding a single predicted product of 312 bp in gel electrophoresis followed by restriction digestion with restriction endonuclease HaeIII. After restriction digestion they gave two bands, one of 101 and the other of 211 bp, while there was negative response with DNA from Chlamydia trachomatis, Neisseria gonorrhoeae, Giardia lamblia, Toxoplasma gondii, Leishmania donovani and Entamoeba histolytica. An optimal analytical sensitivity and specificity of one T. vaginalis organism per PCR was achieved. Sequence of symptomatic and asymptomatic strains of axenic and clinical isolates are somewhat differentiated on the basis of point mutations in their 18S rRNA gene. Conclusions: Only few factors are known to predict symptoms of T. vaginalis infection, although the majority of women are infected with trichomoniasis are reported. Therefore the application of sensitive PCR based diagnosis may be quite useful for routine diagnosis of T. vaginalis strains.
Molecular detection of blood pathogens and their impacts on levels of packed cell volume in stray dogs from Thailand
Objective: To evaluate the prevalence of blood parasite infection in stray dogs by PCR technique and the association between levels of packed cell volume (PCV) and blood parasitic infection in stray dogs. Methods: A tota...
In vitro antioxidant activity of Ageratum houstonianum Mill. (Asteraceae)
Objective: To determine the antioxidant property of Ageratum houstonianum leaves. Method: The present study was conducted in three different solvent extracts of leaves of Ageratum houstonianum Mill. (Asteraceae) to evalu...
High HIV sero-prevalence among students of institutions of higher education in Southeast Nigeria
Objective: To investigate the prevalence and sexual behavioural dynamics of HIV infection in students of institutions of higher education (IHEs) as a guide to the design of a tailor-made HIV intervention programmes. Meth...
Detection of IgM and IgG antibodies against hepatitis E virus in donated blood bags from a national voluntary blood bank in Metro Manila, Philippines
Objective: To assess the blood bags obtained from a national voluntary blood bank for the presence of immunoglobulin M (IgM) and immunoglobulin G (IgG) antibodies against hepatitis E virus (HEV). Methods: Plasma from the...
Prediction and conservancy analysis of promiscuous T-cell binding epitopes of Ebola virus L protein: An in silico approach
Objective: To predict T-cell antigenic epitopes from the L protein of the Zaire ebolavirus strain, which will help in the development of an effective epitope based vaccine. Methods: The L protein was selected due to comp...