Characterization of drug resistance mutations in ART-naïve HIV-1 infected children in Northern Vietnam
Journal Title: Asian Pacific Journal of Tropical Disease - Year 2015, Vol 5, Issue 9
Abstract
Objective: To investigate the profile of drug resistance-associated mutations in pol gene of antiretroviral therapy-naïve HIV-1 infected children enrolled in National Hospital Pediatrics in Northern Vietnam. Methods: Genotyping was performed on 134 antiretroviral therapy-naïve plasma samples from HIV-1 infected children. HIV-1 pol gene was amplified using primers for protease and reverse transcriptase and sequenced using the BigDye chemistry. The mutations were analyzed based on the Stanford University HIV-1 Drug Resistance Database and ISA-USA list. Results: All the children were infected with HIV-1 CRF01_AE subtype. Major protease inhibitor resistance mutations were found in 2 children (2.3%) and reverse-transcriptase inhibitor resistance mutations were found in 5 children (7.7%). The protease inhibitor mutations were observed M46L and L90M and reverse-transcriptase inhibitor mutations were M184I, K65R, Q151M, T69N, L210W, Y181C, M230L and K101E. Conclusions: This is the first study reporting the prevalence of drug resistance-associated mutation in naïve HIV-1 infected children in Northern Vietnam. These data also emphasize the importance of genotypic resistance testing of HIV-1 infected children before initiating treatment in order to achieve better clinical outcome.
Development of a multiplex polymerase chain reaction protocol for the simultaneous detection of Salmonella enterica serovar Typhi and Class 1 integron
Objective: To develop a multiplex polymerase chain reaction (PCR) protocol for the simultaneous detection of Salmonella enterica serovar Typhi (S. Typhi) and Class 1 integron, so as to aid rapid diagnosis of S. Typhi cas...
Isolation and screening of antibiotic producing actinomycetes from soils in Gondar town, North West Ethiopia
Objective: To isolate and screen antibiotic producing actinomycetes from potential soil samples of Gondar town, Ethiopia. Methods: Fifteen soil samples were collected, serially diluted and spread on starch casein and oat...
Prevalence and antibiogram profiles of Escherichia coli O157:H7 isolates recovered from three selected dairy farms in the Eastern Cape Province, South Africa
Objective: To investigate the occurrence and antibiotics susceptibility of Escherichia coli (E. coli) O157:H7 isolates from raw milk, cattle udder, milking machines and worker’s hand swabs from three selected commercial...
Biological synthesis of silver nanoparticles by using Viola serpens extract
Objective: To formulate a biological approach for the biological synthesis of silver nanoparticles using aqueous extracts of leaves of Viola serpens which is considered as a ecofriendly method as it does not include any...
Screening and evaluation of antioxidant, antimicrobial, cytotoxic, thrombolytic and membrane stabilizing properties of the methanolic extract and solvent-solvent partitioning effect of Vitex negundo Bark
Objective: To investigate different biological activities of the methanolic extract and solventsolvent partitioning of Vitex negundo (V. negundo) bark. Methods: In-vitro anti-oxidant study was determined using total phen...