“GENOME SEQUENCE ANALYSIS OF SOLANUM LYCOPERSICUM SHOWING THE SITE OF RESTRICTION ENZYMES OF RNA SEQUENCE BY APPLYING NEB CUTTER AS BIOINFORMATICS TOOL”
Journal Title: International Journal of Bio-Technology and Research (IJBTR) - Year 2017, Vol 7, Issue 3
Abstract
Sequencing the genome of the crop Solanum Lycopersicum will help to identify beneficial gene in other plant relative of tomato such as potato, pepper. As well as, using this genome information to develop a wide variety of beneficial traits, the tomato genomic resources database is an online and interactive relational database, developed using open resources software. NEB offers several helpful interactive tools for research and experimental deasign.NEB cutter accepts an input sequence, picked up from a local file or retrieved from NCBI as a gene bank file, via its accession number. The DNA restriction pattern with known restriction enzymes was determined. NEB cutter is a program available via a web server (http:/tools.neb.com/Neb cutter) that will accept an input DNA/RNA sequence. NEB offers several helpful interactive tools for research and experimental design. NEB cutter accepts an input sequence, picked up from a local file or retrieved from NCBI as a gene bank file, via its accession number.
Authors and Affiliations
UMA KUMARI, ASHOK KUMAR CHOUDHARY
Effect of L - Glutamine on in Vitro Callus Induction and Embryogenic Potential of Stevia Rebaudianabert
The present investigation was carried out to find out the effect of L-Glutamine on in vitro callus induction using different explants from 3-4 months old plantlets of S. rebaudiana. The best responseBest response was obt...
Hypersensitive Response: “A Player In Plant Defense”
Plants have developed sophisticated mechanisms to protect themselves from various diseases. Besides preformed physical and chemical barrier that hinders infection, a wide range of defence responses are induced only after...
HORIZONTAL GENE TRANSFER IN PLASMID: ARE WE CLOSE TO ELIMINATING PERIODONTAL PATHOGENS?
In clinical periodontal practice, patients with periodontitis frequently yield subgingival pathogens, resistant to therapeutic concentrations of commonly used antibiotics. The oral cavity is believed to provide excellent...
EFFECT OF PRIMING WITH GIBBERELLIN ON GERMINATION AND EXPRESSION OF GA BIOSYNTHESIS GENE OF TOMATO (SOLANUM LYCOPERSICUM L.) SEEDLINGS UNDER SALT STRESS
Seed germination is the initial step of plant development. Seed priming with salt enhances seed germination in tomato (Solanum lycopersicum L.); however, the molecular and physiological mechanisms underlying the enhancem...
STUDY OF CRUDE EXTRACT FROM LAKOOCHA HEARTWOOD AGAINST ISOLATED FUNGUS
The extract of heartwood and bark from lakoocha (Artocarpus lakoocha Roxb.) have pharmacollogical properties and antioxidant activities. These extracts have also been reported to exhibit antibacterial activity against a...