RegStatGel: proteomic software for identifying differentially expressed proteins based on 2D gel images.

Journal Title: Bioinformation - Year 2011, Vol 6, Issue 10

Abstract

Image analysis of two-dimensional gel electrophoresis is a key step in proteomic workflow for identifying proteins that change under different experimental conditions. Since there are usually large amount of proteins and variations shown in the gel images, the use of software for analysis of 2D gel images is inevitable. We developed open-source software with graphical user interface for differential analysis of 2D gel images. The user-friendly software, RegStatGel, contains fully automated as well as interactive procedures. It was developed and has been tested under Matlab 7.01. AVAILABILITY: The database is available for free at http://www.mediafire.com/FengLi/2DGelsoftware.

Authors and Affiliations

Keywords

Related Articles

HIV reverse transcriptase: Structural interpretation of drug resistant genetic variants from India

The reverse transcriptase (RT) enzyme is the prime target of nucleoside/ nucleotide (NRTI) and non-nucleoside (NNRTI) reverse transcriptase inhibitors. Here we investigate the structural basis of effects of drug-resistan...

RegStatGel: proteomic software for identifying differentially expressed proteins based on 2D gel images.

Image analysis of two-dimensional gel electrophoresis is a key step in proteomic workflow for identifying proteins that change under different experimental conditions. Since there are usually large amount of proteins and...

HPLC Retention time prediction for metabolome analysi.

Liquid Chromatography Time-of-Flight Mass Spectrometry (LC-TOF-MS) is widely used for profiling metabolite compounds. LC-TOF-MS is a chemical analysis technique that combines the physical separation capabilities of high-...

Structural segments and residue propensities in protein-RNA interfaces: comparison with protein-protein and protein-DNA complexes.

The interface of a protein molecule that is involved in binding another protein, DNA or RNA has been characterized in terms of the number of unique secondary structural segments (SSSs), made up of stretches of helix, str...

Download PDF file
  • EP ID EP86080
  • DOI 10.6026/97320630006389
  • Views 142
  • Downloads 0

How To Cite

(2011). RegStatGel: proteomic software for identifying differentially expressed proteins based on 2D gel images.. Bioinformation, 6(10), 389-390. https://europub.co.uk/articles/-A-86080