Simplified detection of the asymmetric polymerase chain reaction-amplified DNA and its application in the target identification
Journal Title: Journal of Applied Biology & Biotechnology - Year 2018, Vol 6, Issue 2
Abstract
The nucleic acid amplification methods such as the polymerase chain reaction (PCR) and the loop-mediated isothermal amplification rely on the detection of the amplified products by means of agarose gel electrophoresis. The detection of the amplified target DNA in an asymmetric PCR was simplified by carrying out the probe hybridization, polymerization, and the subsequent measurement of fluorescence of the double-stranded target DNA (dsDNA) using the Qubit® dsDNA BR Assay Kit. This method was validated by detecting the lacZ gene that is present in the pUC 18 plasmid as well as by detecting the CDH13 gene that is present in the human genomic DNA.
Phenotypic and genotypic diversity of Xanthomonas axonopodis pv. manihotis causing bacterial blight disease of cassava in Kenya
Cassava bacterial blight (CBB), caused by Xanthomonas axonopodis pv. manihotis (Xam), is the most important bacterial disease of cassava. There is no information available on the morphological and genetic variability of...
Establishment of in vitro regeneration from petiole explants and assessment of clonal fidelity by ISSR markers in Luffa acutangula L.Roxb
An improved in vitro organogenesis was achieved from petiole explants of Luffa acutangula L. Roxb, a medicinally and economically important cucurbitaceous member. Morphogenetic response of petiole explants excised from i...
Boron toxicity induces altered expression of miRNAs in French bean (Phaseolus vulgaris L.)
French bean (Phaseolus vulgaris L.), a legume grown all over the world, is an important pulse crop of India whose yield is affected by various biotic and abiotic stresses. Micro RNAs (miRNAs) have been shown to play an i...
Isolation and in silico characterization of full-length cinnamyl alcohol dehydrogenase gene involved in lignin biosynthesis in Neolamarckia cadamba
Cinnamyl alcohol dehydrogenase (CAD) catalyzes the reduction of cinnamaldehyde to ρ-coumaryl, coniferyl, and sinapyl alcohols during the last stage of lignin biosynthesis pathway. The CAD gene expression is believed to b...
Substrate optimization for cultivation of Pleurotus ostreatus on lignocellulosic wastes (coffee, sawdust, and sugarcane bagasse) in Mizan–Tepi University, Tepi Campus, Tepi Town
Tepi town is rich in lignocellulosic wastes such as coffee waste (Cw), sawdust (Sd), and sugarcane bagasse (Sb) which possibly used as mushroom substrate. Therefore, the purpose of this study was to assess the suitabilit...