On Using DNA Distances And Consensus In Repeats Detection
Journal Title: Acta Technica Napocensis- Electronica-Telecomunicatii (Electronics and Telecommunications) - Year 2012, Vol 53, Issue 4
Abstract
Sequence repeats are the simplest form of regularity and analyzing repeats can lead to first clues to evidencing new biological phenomena. Many of the methods for detecting repeated sequences are part of the digital signal processing (DSP) field and, therefore, the numerical representation of genomic signals is very important. Most of these methods use distances and consensus sequences to generate candidate sequences. This paper presents results obtained using a dedicated numerical representation and a mapping algorithm with different distances and consensus types to isolate the position of DNA repeats with specific lengths.
Authors and Affiliations
Petre POP
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