On Using DNA Distances And Consensus In Repeats Detection
Journal Title: Acta Technica Napocensis- Electronica-Telecomunicatii (Electronics and Telecommunications) - Year 2012, Vol 53, Issue 4
Abstract
Sequence repeats are the simplest form of regularity and analyzing repeats can lead to first clues to evidencing new biological phenomena. Many of the methods for detecting repeated sequences are part of the digital signal processing (DSP) field and, therefore, the numerical representation of genomic signals is very important. Most of these methods use distances and consensus sequences to generate candidate sequences. This paper presents results obtained using a dedicated numerical representation and a mapping algorithm with different distances and consensus types to isolate the position of DNA repeats with specific lengths.
Authors and Affiliations
Petre POP
Keywords
Related Articles
- EP ID EP114636
- DOI -
- Views 111
- Downloads 0
LabView FPGA Implementation of Digital Reverberators
Dealing with large amounts of data always was a delicate operation. Mobile telecommunications operators need high quality management systems to provide top-class services for their customers. The challenge is to assure d...
A Novel End-To-End QoS Framework Over Heterogeneous Networks - An Architectural Approach
End-to-end QoS (Quality of Service) provisioning over heterogeneous networks is a major challenge. The poor communication between Service Providers, the increasing complexity of the supported services, the need for fulfi...
Implementation Issues For a Video Streaming Server In IEEE 802.11E Wlans
Recent years have seen a proliferation of real-time multimedia traffic over a more and more heterogeneous Internet. Video streaming at high, consistent quality over wireless links proves to be a difficult task. Several...
An Experimental Architecture For Basic IPTV Concepts Implementation and Testing
The paper describes basic concepts and a practical implementation of a simple architecture for IPTV content creation and distribution. The architecture is conceived to make possible extensive tests. Audio-video content i...
Broadband Power Amplifier Nonlinearity Cancellation in OFDM Systems
One drawback of OFDM systems is the high peak-to-average power ratio, which imposes strong requirements on the linearity of power amplifiers (PAs). Such linearity requirements translate into high back-off that results in...